Hmmm... I would have thought the frame-counter drive was outside the area of exposure, but if not, then perhaps it could be the cause. Assume you are shooting 120, and not 220?
I will check mine tonight when I get home and update on suspected position of the drive...
Regardless, I have shot a variety of 120 and 220, mostly C41 stuff, and have never seen a mark on my negs. Skj.